Databases:

• EMBL http://www.ebi.ac.uk/embl/
• ENSEMBL http://www.ensembl.org/
• NCBI http://www.ncbi.nlm.nih.gov/
• TIGR http://www.tigr.org/
• SWISS-PROT http://www.expasy.org/sprot/ and http://www.ebi.ac.uk/swissprot/

• NCBI tools - http://www.ncbi.nlm.nih.gov/Tools/index.html
• TIGR tools - http://www.tigr.org/software/
• EMBL-EBI - http://www.ebi.ac.uk/services/
• Softberry - http://www.softberry.com/berry.phtml (genomic.sanger.ac.uk)
• MIT tools - http://genes.mit.edu/

• BLAST - http://www.ncbi.nlm.nih.gov/BLAST/
• CLUSTALW - http://www.ebi.ac.uk/clustalw/
• Sequence conversion - http://thr.cit.nih.gov/molbio/readseq/
• Reverse Complement - http://www.ualberta.ca/~stothard/javascript/rev_comp.html
• Codon usage -
  http://gcua.schoedl.de/
  http://bioweb.pasteur.fr/seqanal/interfaces/codonw.html
• GC content - http://bioweb.pasteur.fr/seqanal/interfaces/geecee.html
• Translation - http://www.bioinformatics.vg/bioinformatics_tools/JVT.shtml
• Genefinder - http://www.softberry.com/berry.phtml?topic=index&group=programs&subgroup=gfind
• GENSCAN - http://genes.mit.edu/GENSCAN.html
• ORF finder - http://www.ncbi.nlm.nih.gov/gorf/gorf.html

• Bioinform-Global Bioinformatics News Service
• Biology WorkBench
• Blocks WWW Server
• Computational Biology Centers
• National Center for Genome Resources
• Washington University Genome Sequencing Center
• Whitehead Institute Center for Genome Research  

Bioinformatics Unit
Jyothi Thimmapuram, Ph.D.
330 Edward R. Madigan Laboratory, 1201 W. Gregory Drive, Urbana, IL 61801
Phone: (217) 244-7355     FAX: (217) 265-5066      Email: jyothit@illinois.edu