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Hardware

  • SGI Origin 2000 Supercomputer with 32 processors
  • Sun Enterprise E250 server with dual processors
  • Sun E280R server with dual processors
  • 2 Sun Blade1000 servers with dual processors
  • Mac and PC Workstations
  • Automated Back tape up
  • HP Plotter Printer

Software List

SAS 9.1.3 sp1, GeneSpring, R

Polybayes_3_0, Repeat Masker, Consed, Emboss, Glimmer, Matlab, PTA, Phred/Phrap, Staden, CAP 3, NCBI BLAST, HT BLAST, GRIDBLAST (PBS Queing Through Web), image, QTL Cartographer, Flip

Pipeline, Estima, Magicmirror, GridCluster, Decypher, and various in house tools.

SGI computerSun logo

Database Systems
  • ORACLE 9

All internal and external projects, applications, data management, and web tools theat require a relational database

  • Mirrored Databases

NCBI, TiGR, Swissprot, TiAR, KEGG, UniGENE, EST

Mirrored Databases are using magic mirror. This list not all inclusive. We can downlaod and mirror others as requested.


Bioinformatics Unit
Jyothi Thimmapuram, Ph.D.
330 Edward R. Madigan Laboratory, 1201 W. Gregory Drive, Urbana, IL 61801
Phone: (217) 244-7355      FAX: (217) 265-5066      Email: jyothit@uiuc.edu

Last edited: 12 FEB 2008